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Saturday 28 October 2023

A robust case for design II.

 Understanding the Biochemistry — and Intelligent Design — of Muscle Contraction



In an article yesterday, I gave a short overview of the arrangement and structure of muscles. Here, I will describe the biochemistry of muscle contraction. Readers may find it slightly easier to follow the discussion that follows by first viewing this short animation, which describes the sliding filament model of muscle contraction.

The Structure of a Muscle Fiber

previously noted that muscles contain thousands of cylindrical cells called muscle fibers, or myocytes. The motor neuron terminates at the muscle fiber’s neuromuscular junction. The tip of the motor neuron is known as the axon terminal, and it contains sacs of acetylcholine, an important neurotransmitter involved in muscle contraction. The muscle fiber also has a membrane called the sarcolemma, containing acetylcholine receptor sites, in addition to an inactivator called cholinesterase. The small space between the sarcolemma and axon terminal is called the synapse, or synaptic cleft.

The muscle fiber contains thousands of individual contracting units known as sarcomeres. These are organized end-to-end in cylinders known as myofibrils. In the center of the sarcomere are thick filaments comprised predominantly of the protein myosin, and thin filaments containing actin can be found at the ends, attached to the end boundaries of the sarcomere (known as the Z discs) by the protein titin. The structure of the muscle fiber is shown in the figure below:




Muscle contraction is driven by two contractile proteins — myosin and actin. Each myosin molecule consists of a long tail and a globular head. Myosin heads have ATPase activity, which allows them to hydrolyze ATP to generate energy for muscle contraction. Myosin heads also have binding sites for actin and ATP. Actin has binding sites for myosin heads. However, these binding sites are typically covered by two inhibitory proteins known as tropomyosin and troponin when the muscle is relaxed. These inhibitory proteins prevent the sliding of myosin and actin during relaxation of the muscle fiber.

The sarcomeres are surrounded by the sarcoplasmic reticulum (the muscular equivalent of the endoplasmic reticulum), which serves as a reservoir of calcium ions (Ca2+). As we shall see, Ca2+ ions are required for muscle contraction.

Polarization of the Sarcolemma

When a muscle fiber is in a state of relaxation, the sarcolemma has a resting potential, or is said to be polarized. This refers to the difference in electrical charges between the inside and outside. When the sarcolemma is polarized, there is a positive charge outside relative to the negatively charged inside. There is a greater concentration of sodium ions (Na+) outside the cell and a greater concentration of potassium ions (K+) and negative ions inside the cell.

Because of the concentration gradient, the Na+ ions tend to diffuse into the cell and the K+ ions tend to diffuse outside. These are actively transported back out and in respectively by the sodium and potassium pumps, which depend upon ATP to maintain polarization and muscle relaxation until a change is stimulated by a nerve impulse.

Depolarization of the Sarcolemma

The first step in muscle contraction is the arrival of a nerve impulse at the axon terminal, stimulating the release of the neurotransmitter acetylcholine. The acetylcholine diffuses across the synapse and binds to acetylcholine receptors on the sarcolemma. This renders the sarcolemma extremely permeable to Na+ ions, which rapidly enter the cell. This reverses the charges such that there is now a positive charge on the inside of the sarcolemma relative to the outside. This charge reversal is known as depolarization.

Inward folds on the sarcolemma known as transverse tubules (or, T tubules) carry this electrical impulse (referred to as an action potential) to the interior of the muscle cell. Depolarization triggers the release of Ca2+ ions from the sarcoplasmic reticulum. These bind to the troponin-tropomyosin complex, moving it away from the actin filaments.

The Sliding Filament

With the binding sites on actin now available, actin can be bound by the myosin heads, forming cross-bridges. Once the cross-bridges are formed, the myosin heads pivot, pulling the thin filaments towards the center of the sarcomere. This action is called the power stroke and is powered by the energy released when ATP is hydrolyzed. After the power stroke, the myosin heads require ATP to detach from actin. ATP is hydrolyzed into ADP and inorganic phosphate, which energizes the myosin head for the next cycle.

The cycle of cross-bridge formation, power stroke, ATP hydrolysis, and detachment repeats as long as calcium ions are present and ATP is available. This results in the shortening of the sarcomere and, collectively, the entire muscle fiber. This leads to muscle contraction. The force generated by many muscle fibers contracting in unison allows for body movement. The sliding filament model is graphically summarized in the figure below:



Repolarization

Muscle relaxation occurs when the electrical stimulation ceases — resulting in the ionic concentrations inside and outside the cell returning to their resting state. To restore the resting-membrane potential, the Na+ and K+ pumps actively transport sodium ions out of the cell while bringing potassium ions back into the cell. This returns the membrane potential to its polarized, negative resting state, typically around -90mV for muscle cells. Repolarization results in the myosin heads releasing their grip on actin, and calcium ions are actively transported back into the sarcoplasmic reticulum, causing muscle relaxation.

Evidence of Design

As should be apparent from the forgoing discussion, muscle contraction — which we so easily take for granted — is an incredibly complex and elegant process, involving incredible engineering and design. The process of muscle contraction and relaxation requires the coordinated action of actin, myosin, troponin, tropomyosin, acetyl choline, ion channels, and much more. To contend that the phenomenon of muscle contraction arose through a blind and undirected process, one tiny Darwinian step after the other, seems to me to strain credulity.

A robust case for design.

 The Incredible Design of Muscles



Muscle is one of the most fundamental of animal tissues. It is muscles that animate our bodies — allowing us to move, stand upright, breathe, and even speak. Muscles are precisely the sort of thing that we might expect a designer of embodied intelligent beings to produce. At the very least, on the supposition of intelligent design, the existence of muscles is not particularly surprising. But how surprising is the existence of muscles under the perspective of naturalism? 

The number of muscles in the human body exceeds six hundred. The majority are attached by tendons to the skeleton — their primary purpose being to move the skeleton. When skeletal muscles contract, they shorten and pull the bone. The contraction of muscles also generates heat, which contributes to the maintenance of our core body temperature. The muscular system is unable to perform its job of animating the skeleton without assistance from the nervous, respiratory, and circulatory systems. The electrochemical impulses that drive muscle contraction are transmitted by motor neurons (the nervous system). Muscle cells contain many mitochondria, which perform cellular respiration, generating the ATP needed for contraction. This depends critically on the exchange of the gases oxygen and carbon dioxide between the blood and air by means of the respiratory system. The oxygen is brought to the muscles, and carbon dioxide removed, by means of the circulatory system. Thus, a tremendous amount of functional integration is required for muscle contraction to work.

In a series of two articles, I will summarize the incredible design of muscles that allows them to fulfil their function. In the first part, we shall review the structure and arrangements of muscles, as well as muscle tone and sense. In a second article, I shall explain the fascinating biochemistry of muscle contraction. I hope that the reader will get a sense for how improbable all this is from the vantage of the naturalistic hypothesis. The information that follows is well established and can be found in any decent textbook on anatomy and physiology

The Structure of Muscles

Each skeletal muscle contains many thousands of cells called muscle fibers, or myocytes. The number of muscle fibers that contract depends on the task being performed. For example, picking up a book requires the contraction of more finger-flexing muscle fibers than picking up a pencil, which requires the contraction of only a small number of fibers. 

The muscle fibers are organized into bundles called fascicles. These fascicles are given structural support by a connective tissue that surrounds them called the perimysium. The perimysium also protects and distributes the blood vessels and nerves that supply the muscle, in addition to facilitating the transmission of forces generated by muscle contractions. Together with the endomysium (connective tissue that surrounds individual muscle fibers) and the epimysium (connective tissue that surrounds the entire muscle), the perimysium helps to maintain the overall integrity and organization of the skeletal muscle. The structure of skeletal muscles is shown in the figure below



Having a muscular, nervous and respiratory system will do one no good, however, unless the muscles are attached to the skeleton. Muscles are attached to bones by tendons, which are tough, fibrous, connective tissues. When a muscle contracts, it generates force, which is transmitted to the bones by tendons, allowing the limb or body part to move. Tendons also provide stability to joints — acting as stabilizing elements that prevent excessive or unwanted movement, helping to maintain joint integrity during muscular contractions. Generally, a muscle possesses at least two tendons, each of them connected to a different bone. The attachment point where the muscle’s tendon connects to a less movable bone is referred to as the origin, whereas the attachment point where the muscle’s tendon connects to a more movable bone is called the insertion. When the muscle contracts, it pulls the insertion bone towards the origin, resulting in joint movement.

The Arrangement of Muscles

There are two common types of arrangements of muscles across joints and around the skeleton — namely, opposing antagonists and cooperative synergists. Antagonistic muscles are pairs of muscles that have opposite actions at a joint. One muscle in the pair is responsible for producing a specific movement, while the other has an opposing action. For example, the biceps and triceps in the upper arm are a classic example of antagonistic muscles (see the figure below). 



When you flex your elbow, the biceps (located on the front of the upper arm) contract to bend the arm, while the triceps relax and lengthen. Muscles are unable to push, exerting no force when they relax. Thus, the elbow can be flexed by the biceps but cannot be extended, and thus we need another muscle called the triceps (located on the back of the upper arm). When you extend your elbow, the triceps contract and the biceps relax.

Synergistic muscles, by contrast, work together to produce the same movement at a joint. They assist the prime mover in performing a specific action, helping to stabilize the joint and provide additional force or control to the movement. For example, when you flex your elbow, the biceps are the prime mover, but other muscles (the brachialis and brachioradialis) act as synergists to assist the biceps in generating the movement. These synergistic muscles provide support and help fine-tune the motion. You might wonder why we need three muscles to carry out the same task. When your hand is positioned palm up, the prime mover (which does most of the work of flexing) is the biceps. When your hand is positioned palm down, the prime mover is the brachialis. When your hand is positioned thumb up, the prime mover is the brachioradialis. Thus, depending on the position of your forearm, different muscles can be more or less effective at generating force.

Synergists can also serve to steady or stabilize a joint, rendering it possible to make more precise movements. For example, when drinking a glass of water, the prime mover for flexing the arm is the biceps. To assist in getting the water to your mouth and not spilling it down your chin or over your shoulder, the joint is stabilized by the shoulder muscles.

 Role of the Brain in Muscle Movement

he region of the brain responsible for generating the nerve impulses for movement is the frontal lobes of the cerebrum (the frontal lobes are labelled in the figure given below).



muscle fibers contract when they receive electrochemical impulses generated from the motor areas of the frontal lobes, that travel along motor neurons (grouped into nerves). A single neuron can innervate anywhere between a few to hundreds of muscle fibers, as its axon can branch extensively (this is referred to as a motor unit).

In muscles that carry out small and precise movements (such as those responsible for moving the eyes or fingers), muscles typically have small motor units (2 to 100 muscle fibers per neuron). On the other hand, muscles that have to carry out powerful rather than precise movements (for example, the large muscles of the hips and legs) have hundreds of muscle fibers per neuron.

The cerebellum (also labelled in the figure above) is the part of the brain responsible for regulating coordination and motor control, operating largely below the level of consciousness. This means that many of its functions occur without our awareness. The cerebellum receives input from multiple sensory systems, including the proprioceptive system (information about the body’s position and movements), the vestibular system (balance and spatial orientation), and the visual and auditory systems. These inputs help the cerebellum establish a sense of where the body is in space and how it is moving. The cerebellum also receives information from the motor cortex, which provides “efference copies” of the motor commands sent to muscles. Efference copies are predictions of the intended motor output and are used to compare with the actual sensory feedback. This comparison helps the cerebellum detect any discrepancies between the intended and actual movements. The cerebellum acts as an integration center for sensory and motor information. It constantly compares the efference copies with the incoming sensory feedback, such as proprioceptive signals from stretch receptors and Golgi tendon organs, as well as visual and vestibular input. This comparison occurs at the subconscious level, allowing the cerebellum to detect errors in movement even before they become apparent to the conscious mind.

When the cerebellum detects errors in movement or discrepancies between the intended and actual outcomes, it generates corrective signals. These signals are sent to the motor cortex and other motor control centers in the brain. The cerebellum adjusts the ongoing motor commands to correct the errors and improve the precision and accuracy of movements.

The cerebellum is also involved in motor learning and adaptation. Through repetitive practice and learning, the cerebellum stores information about various motor tasks and their associated sensory feedback. This allows it to refine movements over time, even without conscious awareness. For example, when you learn to ride a bike, the cerebellum helps you automatically adjust your balance and coordination without needing to consciously think about it.

The cerebellum also plays a role in feedforward control, where it predicts the sensory consequences of planned movements. It can make anticipatory adjustments to movements based on the expected sensory feedback. For example, when you reach for an object, the cerebellum can adjust the motor commands to account for the expected weight and resistance of the object, allowing for smoother and more precise movements.

The cerebellum also receives information from inner ear receptors for equilibrium and uses it to balance the contractions of antagonistic muscles such that the contractions of one set do not cause the body to fall over.

Muscle Tone

With the exception of certain stages of sleep, the majority of our muscles exist in a state of slight contraction, called muscle tone. This enables us to keep an upright posture. Only a few muscle fibers in the muscle have to contract in order for the muscle to be in a slightly contracted state. To prevent the muscle from becoming fatigued, alternate fibers take turns at contracting. This is subconsciously regulated by the cerebellum. The heat produced by muscle fibers during cellular respiration (necessary for production of ATP) accounts for roughly 25 percent of the total body heat at rest.

Muscle Sense

Muscle sense (also known as proprioception) is the body’s ability to sense and perceive the position, movement, and tension of one’s muscles and joints. It plays a crucial role in maintaining balance and coordinating movement. It operates in the background of our conscious awareness, enabling us to perform various tasks without having to constantly think about the position of our limbs or the force required for specific actions. Activities that involve fine motor skills (such as typing on a keyboard or playing on a musical instrument) depend heavily on muscle sense for control and accuracy, and these improve with repetition and practice due to what is called muscle memory. As neural pathways that control the necessary movements become strengthened, the experienced pianist or typist need not consciously think about every movement.

Muscles contain receptors known as stretch receptors (otherwise known as muscle spindles or proprioceptors), which detect changes in muscle length when it is stretched. The brain interprets these sensory impulses to generate a mental image of where the muscle is in space. The impulses responsible for muscle sense are received and processed by in the cerebellum (for unconscious muscle sense) and the parietal lobes of the cerebrum (for conscious muscle sense).

Evidence of Design

As we have seen, multiple interdependent systems are required for the muscular system to work — among those needed are the circulatory, respiratory, and nervous systems, in addition to the tendons that attach muscle to bone — not to mention the incredible structure and arrangement of the muscles themselves (containing many mitochondria to meet the energy demand; being comprised of thousands of muscle fibers; being arranged antagonistically and synergistically for coordinated action, etc). The origin of the skeletal muscles, then, depends on many co-dependent changes in order to come about. This is not particularly surprising in light of a design perspective, but becomes wildly surprising if we suppose the falsity of design. Thus, muscles provide powerful evidence of intelligent design.

In a second article, I shall review the process of muscle contraction, which (as we will see) takes the inference to design to an entirely new level.

There's a reason that it sounds to good to be true.